_____________________________________________________________________________________________________________________________ | compare | ds dn ds/dn | ds dn ds/dn | ds dn ds/dn | ds dn ds/dn | ds dn ds/dn | |_________|______________________|______________________|______________________|______________________|______________________| | ara tob | 0.08 0.05 1.83 | 0.07 0.01 5.77 | 0.03 0.03 1.05 | 0.16 0.19 0.87 | 0.27 0.02 15.69 | | ara lot | 0.11 0.06 1.76 | 0.10 0.01 11.28 | 0.11 0.03 3.45 | 0.03 0.07 0.44 | 0.32 0.01 23.73 | | ara oen | 0.10 0.09 1.16 | 0.07 0.04 1.62 | 0.04 0.03 1.45 | 0.01 0.07 0.21 | 0.32 0.01 23.66 | | ara epi | 0.17 0.10 1.69 | 0.16 0.03 5.18 | 0.14 0.12 1.16 | 0.44 0.54 0.81 | 0.74 0.45 1.64 | | ara spi | 0.11 0.06 2.04 | 0.05 0.01 4.06 | 0.06 0.04 1.32 | 0.02 0.06 0.38 | 0.20 0.01 15.07 | | tob lot | 0.10 0.05 1.90 | 0.09 0.01 7.54 | 0.07 0.03 2.66 | 0.04 0.08 0.55 | 0.23 0.02 11.54 | | tob oen | 0.05 0.06 0.86 | 0.04 0.04 0.84 | 0.01 0.03 0.34 | 0.02 0.07 0.28 | 0.27 0.02 13.12 | | tob epi | 0.12 0.08 1.51 | 0.12 0.04 2.94 | 0.11 0.10 1.07 | 0.51 0.48 1.05 | 0.59 0.46 1.28 | | tob spi | 0.09 0.04 2.11 | 0.04 0.02 2.14 | 0.02 0.04 0.49 | 0.02 0.05 0.45 | 0.16 0.01 23.54 | | lot oen | 0.12 0.09 1.28 | 0.10 0.04 2.20 | 0.07 0.03 2.59 | 0.02 0.08 0.23 | 0.30 0.01 45.28 | | lot epi | 0.18 0.11 1.74 | 0.19 0.04 4.63 | 0.11 0.12 0.96 | 0.53 0.53 1.00 | 0.73 0.48 1.53 | | lot spi | 0.14 0.07 2.09 | 0.08 0.02 4.41 | 0.10 0.05 2.04 | 0.03 0.06 0.50 | 0.20 0.01 15.20 | | oen epi | 0.15 0.12 1.24 | 0.15 0.08 1.94 | 0.12 0.13 0.93 | 0.48 0.54 0.89 | 0.66 0.47 1.41 | | oen spi | 0.11 0.09 1.31 | 0.04 0.04 0.84 | 0.03 0.05 0.60 | 0.02 0.07 0.28 | 0.20 0.01 15.16 | | epi spi | 0.16 0.10 1.71 | 0.13 0.04 2.98 | 0.14 0.13 1.03 | 0.50 0.45 1.10 | 0.45 0.45 1.00 | | | | | | | | | average | 0.12 0.08 1.62 | 0.10 0.03 3.89 | 0.08 0.06 1.41 | 0.19 0.22 0.60 | 0.38 0.16 13.92 | | epi avg | 0.16 0.10 1.58 | 0.15 0.05 3.53 | 0.12 0.12 1.03 | 0.49 0.51 0.97 | 0.63 0.46 1.37 | |_________|______________________|______________________|______________________|______________________|______________________| |sequence | ycf2 entire sequence | rps7 sequence | rpl23 sequence | psbA sequence full | psbA sequence 400bp | |_________|______________________|______________________|______________________|______________________|______________________|
Fig. 1 Summary of ds, dn, and ds/dn values for all sequences analyzed. "epi avg" is the average with respect to pairwise comparisons between Epifagus and other sequences.
Fig. 2 ds/dn versus nucleotide position (bp) for ycf2 sequences. The "100", "150", and "200" lines represent ds/dn calculated over intervals of 100, 150, and 200 bp, respectively.